Multiplex PCR for simultaneous identification and differentiation of methicillin-resistant Staphylococcus aureus and Staphylococcus pseudintermedius isolated from dogs https://doi.org/10.12982/VIS.2025.001

Main Article Content

Nguyen Pham Thao Nhi
Bui Nguyen Thanh Vy
Nguyen Thuy Y Vi
Nguy Ho Hoang Tho
To My Quyen
Dao Huyen Tran
Nguyen Tran Phuoc Chien
Nguyen Khanh Thuan
Nguyen Thi Lan Anh
Lam Thanh Nguyen

Abstract

Methicillin-resistant Staphylococcus aureus (MRSA) and methicillin-resistant Staphylococcus pseudintermedius (MRSP) are opportunistic pathogens that cause significant diseases in both human and veterinary medicine, particularly in pet animals. In recent decades, the emergence of MRSA and MRSP in pet animals has raised substantial public health concerns due to the high multidrug resistance exhibited by these zoonotic bacteria. Therefore, a rapid and accurate diagnosis is crucial as one of the key strategies for controlling infections caused by MRSA and MRSP. In this study, we applied a simple and cost-effective DNA extraction method, establishing a multiplex PCR assay for the identification and differentiation of MRSA and MRSP isolated from dogs in Vietnam. The results of this study indicate that DNA extraction of MRSA and MRSP using the Tris-EDTA-NaCl-Triton X100 (TENT) method yielded comparable efficacy to using a commercial DNA extraction kit, and the TENT method proved to be more cost-effective. Additionally, a multiplex PCR assay with four primer pairs (27F/1492R, mecA_F/mecA_R, au-F3/au-nucR, and pse-F2/pse-R5) successfully identified and discriminated between MRSA and MRSP. The multiplex PCR demonstrated high specificity with the desired amplification of targeted amplicons and no cross-reactions. Furthermore, the applicability of the diagnostic procedure was demonstrated by identifying field MRSA and MRSP isolated from clinical samples of dogs in Vietnam. Our study, therefore, provides an effective identification procedure for MRSA and MRSP, serving as a prompt countermeasure against the rapid emergence of MRSA and MRSP in Vietnam

Article Details

How to Cite
Nguyen Pham Thao Nhi, Bui Nguyen Thanh Vy, Nguyen Thuy Y Vi, Nguy Ho Hoang Tho, To My Quyen, Dao Huyen Tran, Nguyen Tran Phuoc Chien, Nguyen Khanh Thuan, Nguyen Thi Lan Anh, & Lam Thanh Nguyen. (2024). Multiplex PCR for simultaneous identification and differentiation of methicillin-resistant Staphylococcus aureus and Staphylococcus pseudintermedius isolated from dogs: https://doi.org/10.12982/VIS.2025.001. Veterinary Integrative Sciences, 23(1), 1–10. Retrieved from https://he02.tci-thaijo.org/index.php/vis/article/view/268228
Section
Research Articles

References

Becker, K., Heilmann, C., Peters, G., 2014. Coagulase-negative Staphylococci. Clin. Microbiol. Rev. 27(4), 870-926.

Becker, K., Skov, R.L., von Eiff, C., 2015. Staphylococcus, Micrococcus, and other catalase-positive cocci. In: Jorgensen, J.H., Carroll, K.C., Funke, G., Pfaller,M.A., Landry, M.L., Richter, S.S., Warnock, D.W., Richter, S.S., Patel, R. (Eds.),Manual of Clinical Microbiology. ASM Press, Canada, pp. 354-382.

Chiang, Y.C., Tsen, H.Y., Chen, H.Y., Chang, Y.H., Lin, C.K., Chen, C.Y., Pai, W.Y.,2012. Multiplex PCR and a chromogenic DNA macroarray for the detection of Listeria monocytogens, Staphylococcus aureus, Streptococcus agalactiae, Enterobacter sakazakii, Escherichia coli O157:H7, Vibrio parahaemolyticus, Salmonella spp. and Pseudomonas fluorescens in milk and meat samples. J.Microbiol. Methods. 88(1), 110-116.

Cohn, L.A., Middleton, J.R., 2010. A veterinary perspective on methicillin-resistant Staphylococci. J. Vet. Emerg. Crit. Care. 20(1), 31-45.

Costa, A.M., Kay, I., Palladino, S., 2005. Rapid detection of mecA and nuc genes in Staphylococci by real-time multiplex polymerase chain reaction. Diagn.Microbiol. Infect. Dis. 51(1), 13-17.

Cuny, C., Layer-Nicolaou, F., Weber, R., Köck, R., Witte, W., 2022. Colonization of dogs and their owners with Staphylococcus aureus and Staphylococcus pseudintermedius in households, veterinary practices, and healthcare facilities.Microorganisms. 10(4), 677.

Feßler, A.T., Schuenemann, R., Kadlec, K., Hensel, V., Brombach, J., Murugaiyan, J., Oechtering G., Burgener I.A., Schwarz S., 2018. Methicillin-resistant Staphylococcus aureus (MRSA) and methicillin-resistant Staphylococcus pseudintermedius (MRSP) among employees and in the environment of a small animal hospital. Vet. Microbiol. 221, 153-158.

Foste,r T., 1996. Staphylococcus. In: Baron, S. (Ed.), Medical microbiology, (4th edition). University of Texas Medical Branch at Galveston, Galveston. González-Martín, M., Corbera, J.A., Suárez-Bonnet, A., Tejedor-Junco, M.T., 2020.Virulence factors in coagulase-positive Staphylococci of veterinary interest other than Staphylococcus aureus. Vet. Q. 40(1), 118-131.

Harbarth, S., 2006. Control of endemic methicillin-resistant Staphylococcus aureus–recent advances and future challenges. Clin. Microbiol. Infect. 12(12),1154-1162.

Hassanzadeh, S., Pourmand, M.R., Afshar, D., Dehbashi, S., Mashhadi, R., 2016. TENT: A rapid DNA extraction method of Staphylococcus aureus. Iran. J.Public. Health. 45(8), 1093-1095.

Kim, C.H., Khan, M., Morin, D., Hurley, W., Tripathy, D., Kehrli, Jr. M., Oluoch, A.,Kakoma, I., 2001. Optimization of the PCR for detection of Staphylococcus aureus nuc gene in bovine milk. J. Dairy Sci. 84(1), 74-83.

Kim, H.S., Chon, J.W., Kim, D.H., Song, K.Y., Seo, K.H., 2013. Evaluation of a PCR assay for the rapid detection of Staphylococcus aureus in milk and meat products. Korean J. Food Sci. Technol. 45(6), 791-795.

Li, P., Zhang, D., Li, H., Pang, J., Guo, H., Qiu, J., 2020. Establishment and application of multiplex PCR for simultaneously detecting Escherichia coli, Salmonella, Klebsiella pneumoniae, and Staphylococcus aureus in minks. Front. Vet. Sci. 7, 588173.

McClure, J.M., Zhang, K., 2022. Staphylococci. Molecular typing in bacterial infections, Volume II, Springer, 169-192.

Murakami, K., Minamide, W., Wada, K., Nakamura, E., Teraoka, H., Watanabe, S., 1991. Identification of methicillin-resistant strains of Staphylococci by polymerase chain reaction. J. Clin. Microbiol. 29(10), 2240-2244.

Parte, A.C., Carbasse, J.S., Meier-Kolthoff, J.P., Reimer, L.C., Göker, M., 2020. List of Prokaryotic names with standing in nomenclature (LPSN) moves to the DSMZ. Int. J. Syst. Evol. Microbiol. 70(11), 5607.

Quyet, D., Hung, P.N., Tien, T.V., Thanh, K.C., Dung, Q.A., Tan, H.T., Bac, N.D., Dinh, T.C., Pho, D.C., 2019. Antibiotic resistance profile and methicillinresistant encoding genes of Staphylococcus aureus strains isolated from bloodstream infection patients in Northern Vietnam. Open Access Maced. J.Med. Sci. 7(24), 4406.

Rahman, M., Amin, K., Rahman, S., Khair, A., Rahman, M., Hossain, A., Rahman,A., Parvez, M., Miura, N., Alam, M., 2018. Investigation of methicillin-resistant Staphylococcus aureus among clinical isolates from humans and animals by culture methods and multiplex PCR. BMC Vet. Res. 14(1), 1-6.

Sasaki, T., Kikuchi, K., Tanaka, Y., Takahashi, N., Kamata, S., Hiramatsu, K., 2007.Reclassification of phenotypically identified Staphylococcus intermediusstrains. J. Clin. Microbiol. 45(9), 2770-2778.

Sasaki, T., Tsubakishita, S., Tanaka, Y., Sakusabe, A., Ohtsuka, M., Hirotaki, S.,Kawakami, T., Fukata, T., Hiramatsu, K., 2010. Multiplex-PCR method for species identification of coagulase-positive Staphylococci. J. Clin. Microbiol.48(3), 765-769.

Thai, S.N., Vu, H.T.T., Vu, L.T.K., Do, N.T.Q., Tran, A.T.H., Tang, N.T., Le, H.N.M.,Tran, B.Q., 2019. First report on multidrug-resistant methicillin-resistant Staphylococcus aureus isolates in children admitted to tertiary hospitals in Vietnam. J. Microbiol. Biotechnol. 29, 1460-1469.

van Duijkeren, E., Catry, B., Greko, C., Moreno, M.A., Pomba, M.C., Pyörälä, S.,Ružauskas, M., Sanders, P., Threlfall, E.J., Torren-Edo, J., Törneke, K., 2011.Review on methicillin-resistant Staphylococcus pseudintermedius. J.Antimicrob. Chemother. 66(12), 2705-2714.

Van Nguyen, K., Zhang, T., Thi Vu, B.N., Dao, T.T., Tran, T.K., Thi Nguyen, D.N., Thi Tran, H.K., Thi Nguyen, C.K., Fox, A., Horby, P., 2014. Staphylococcus aureus nasopharyngeal carriage in rural and urban northern Vietnam. Trans. R.Soc. Trop. Med. Hyg. 108(12), 783-790.

Weisburg, W.G., Barns, S.M., Pelletier, D.A., Lane, D.J., 1991. 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173(2), 697-703.